Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Gm6912-201ENSMUST00000117218 544 ntBASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Gm14767-201ENSMUST00000121559 586 ntBASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Gm27680-201ENSMUST00000184192 160 ntBASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Gm37935-201ENSMUST00000192012 982 ntBASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Gm44344-201ENSMUST00000200287 129 ntBASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cchcr1Q8K2I2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Gm9947-201ENSMUST00000067599 2920 ntBASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Gm14701-201ENSMUST00000117156 348 ntBASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC16.17■□□□□ 0.18
Cchcr1Q8K2I2 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Gm23935-201ENSMUST00000102303 57 ntBASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Gm24270-201ENSMUST00000102326 57 ntBASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Gm24245-201ENSMUST00000157318 57 ntBASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cchcr1Q8K2I2 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cchcr1Q8K2I2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms