Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Mir6977-201ENSMUST00000184960 64 ntBASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rfwd3Q8CIK8 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Gm22189-201ENSMUST00000103822 86 ntBASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Gm13385-201ENSMUST00000121089 220 ntBASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Gm8927-201ENSMUST00000181978 981 ntBASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Gm7730-201ENSMUST00000212486 454 ntBASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Gm3222-201ENSMUST00000071282 990 ntBASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Mir497b-201ENSMUST00000093601 125 ntBASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rfwd3Q8CIK8 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Mir698-201ENSMUST00000102164 109 ntBASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Gm15240-201ENSMUST00000118156 720 ntBASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Gm16215-201ENSMUST00000161990 637 ntBASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Gm2445-201ENSMUST00000182798 989 ntBASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rfwd3Q8CIK8 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms