Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smc5Q8CG46 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smc5Q8CG46 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc5Q8CG46 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc5Q8CG46 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smc5Q8CG46 AC122314.1-201ENSMUST00000223056 2239 ntBASIC16.9■□□□□ 0.3
Smc5Q8CG46 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Smc5Q8CG46 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc5Q8CG46 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc5Q8CG46 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc5Q8CG46 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smc5Q8CG46 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc5Q8CG46 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.9■□□□□ 0.3
Smc5Q8CG46 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.9■□□□□ 0.3
Smc5Q8CG46 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Smc5Q8CG46 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Smc5Q8CG46 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Smc5Q8CG46 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smc5Q8CG46 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.9■□□□□ 0.3
Smc5Q8CG46 Gm9229-201ENSMUST00000222777 126 ntBASIC16.9■□□□□ 0.3
Smc5Q8CG46 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc5Q8CG46 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc5Q8CG46 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc5Q8CG46 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Smc5Q8CG46 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Smc5Q8CG46 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smc5Q8CG46 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smc5Q8CG46 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Smc5Q8CG46 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.9■□□□□ 0.3
Smc5Q8CG46 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smc5Q8CG46 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Smc5Q8CG46 Gm38355-201ENSMUST00000192514 1570 ntBASIC16.89■□□□□ 0.3
Smc5Q8CG46 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smc5Q8CG46 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Smc5Q8CG46 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.89■□□□□ 0.29
Smc5Q8CG46 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smc5Q8CG46 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Smc5Q8CG46 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.89■□□□□ 0.29
Smc5Q8CG46 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc5Q8CG46 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.89■□□□□ 0.29
Smc5Q8CG46 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.89■□□□□ 0.29
Smc5Q8CG46 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc5Q8CG46 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc5Q8CG46 Gm6912-201ENSMUST00000117218 544 ntBASIC16.89■□□□□ 0.29
Smc5Q8CG46 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.89■□□□□ 0.29
Smc5Q8CG46 Gm27622-201ENSMUST00000183779 60 ntBASIC16.89■□□□□ 0.29
Smc5Q8CG46 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.89■□□□□ 0.29
Smc5Q8CG46 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smc5Q8CG46 Gm44771-201ENSMUST00000206975 626 ntBASIC16.89■□□□□ 0.29
Smc5Q8CG46 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smc5Q8CG46 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc5Q8CG46 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.89■□□□□ 0.29
Smc5Q8CG46 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc5Q8CG46 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
Smc5Q8CG46 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc5Q8CG46 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Smc5Q8CG46 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc5Q8CG46 Gm27194-201ENSMUST00000175753 2936 ntBASIC16.89■□□□□ 0.29
Smc5Q8CG46 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Smc5Q8CG46 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc5Q8CG46 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc5Q8CG46 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Smc5Q8CG46 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smc5Q8CG46 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smc5Q8CG46 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc5Q8CG46 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc5Q8CG46 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smc5Q8CG46 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Smc5Q8CG46 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc5Q8CG46 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.88■□□□□ 0.29
Smc5Q8CG46 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.88■□□□□ 0.29
Smc5Q8CG46 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smc5Q8CG46 Gm10253-201ENSMUST00000194270 940 ntBASIC16.88■□□□□ 0.29
Smc5Q8CG46 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smc5Q8CG46 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.88■□□□□ 0.29
Smc5Q8CG46 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc5Q8CG46 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Smc5Q8CG46 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Smc5Q8CG46 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc5Q8CG46 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc5Q8CG46 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Smc5Q8CG46 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smc5Q8CG46 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC16.88■□□□□ 0.29
Smc5Q8CG46 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Smc5Q8CG46 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Smc5Q8CG46 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Smc5Q8CG46 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.87■□□□□ 0.29
Smc5Q8CG46 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc5Q8CG46 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.87■□□□□ 0.29
Smc5Q8CG46 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Smc5Q8CG46 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.87■□□□□ 0.29
Smc5Q8CG46 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC16.87■□□□□ 0.29
Smc5Q8CG46 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smc5Q8CG46 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc5Q8CG46 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc5Q8CG46 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smc5Q8CG46 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.87■□□□□ 0.29
Smc5Q8CG46 Gm24420-201ENSMUST00000176676 59 ntBASIC16.87■□□□□ 0.29
Smc5Q8CG46 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smc5Q8CG46 Gm4804-201ENSMUST00000182234 999 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms