Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc28aQ8CEI3 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Mir497b-201ENSMUST00000093601 125 ntBASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc28aQ8CEI3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Gm5566-201ENSMUST00000116118 459 ntBASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Gm9719-201ENSMUST00000162765 543 ntBASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Gm10175-201ENSMUST00000086013 645 ntBASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc28aQ8CEI3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Ccdc28aQ8CEI3 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
Ccdc28aQ8CEI3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28aQ8CEI3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28aQ8CEI3 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28aQ8CEI3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28aQ8CEI3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28aQ8CEI3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28aQ8CEI3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc28aQ8CEI3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.39□□□□□ -0.11
Ccdc28aQ8CEI3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28aQ8CEI3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28aQ8CEI3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.39□□□□□ -0.11
Ccdc28aQ8CEI3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28aQ8CEI3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28aQ8CEI3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28aQ8CEI3 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc28aQ8CEI3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms