Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc38Q8CDN8 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc38Q8CDN8 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ccdc38Q8CDN8 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.23■□□□□ 0.03
Ccdc38Q8CDN8 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc38Q8CDN8 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc38Q8CDN8 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc38Q8CDN8 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc38Q8CDN8 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ccdc38Q8CDN8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Gm13385-201ENSMUST00000121089 220 ntBASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Gm22175-201ENSMUST00000175007 78 ntBASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Gm44344-201ENSMUST00000200287 129 ntBASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc38Q8CDN8 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 Gm12585-201ENSMUST00000117307 290 ntBASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 Gm25925-201ENSMUST00000158314 306 ntBASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 Gm3436-201ENSMUST00000179930 840 ntBASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc38Q8CDN8 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc38Q8CDN8 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.21■□□□□ 0.02
Ccdc38Q8CDN8 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc38Q8CDN8 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc38Q8CDN8 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Gm14767-201ENSMUST00000121559 586 ntBASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Gm6888-201ENSMUST00000221983 706 ntBASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc38Q8CDN8 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms