Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Gm25144-201ENSMUST00000179561 110 ntBASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Gm25352-201ENSMUST00000179815 110 ntBASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Gm27533-201ENSMUST00000183800 152 ntBASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vcpip1Q8CDG3 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vcpip1Q8CDG3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vcpip1Q8CDG3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Vcpip1Q8CDG3 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vcpip1Q8CDG3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Vcpip1Q8CDG3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
Vcpip1Q8CDG3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Gm33320-201ENSMUST00000192232 530 ntBASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Gm44719-201ENSMUST00000206404 149 ntBASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Shd-206ENSMUST00000225145 998 ntBASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vcpip1Q8CDG3 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Mir1897-201ENSMUST00000122581 272 ntBASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Gm27437-201ENSMUST00000183429 107 ntBASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Gm18041-201ENSMUST00000218210 618 ntBASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms