Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm18624-201ENSMUST00000220966 658 ntBASIC15.92■□□□□ 0.14
Vps53Q8CCB4 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.92■□□□□ 0.14
Vps53Q8CCB4 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Vps53Q8CCB4 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps53Q8CCB4 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps53Q8CCB4 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps53Q8CCB4 Mypopos-202ENSMUST00000205975 2321 ntBASIC15.92■□□□□ 0.14
Vps53Q8CCB4 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps53Q8CCB4 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC15.92■□□□□ 0.14
Vps53Q8CCB4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps53Q8CCB4 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps53Q8CCB4 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps53Q8CCB4 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.92■□□□□ 0.14
Vps53Q8CCB4 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps53Q8CCB4 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Gm15824-201ENSMUST00000119516 955 ntBASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Gm13829-201ENSMUST00000119600 138 ntBASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Mir6392-201ENSMUST00000184924 108 ntBASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Mir125a-201ENSMUST00000083545 68 ntBASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Vps53Q8CCB4 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Gm44719-201ENSMUST00000206404 149 ntBASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.9■□□□□ 0.14
Vps53Q8CCB4 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps53Q8CCB4 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Vps53Q8CCB4 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps53Q8CCB4 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps53Q8CCB4 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.89■□□□□ 0.13
Vps53Q8CCB4 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Vps53Q8CCB4 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps53Q8CCB4 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Vps53Q8CCB4 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Vps53Q8CCB4 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.89■□□□□ 0.13
Vps53Q8CCB4 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.89■□□□□ 0.13
Vps53Q8CCB4 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms