Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynpoQ8CC35 BC001981-202ENSMUST00000191393 1545 ntBASIC13.25□□□□□ -0.29
SynpoQ8CC35 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynpoQ8CC35 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Gm10275-202ENSMUST00000168697 495 ntBASIC13.25□□□□□ -0.29
SynpoQ8CC35 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynpoQ8CC35 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Gm10275-201ENSMUST00000092620 635 ntBASIC13.25□□□□□ -0.29
SynpoQ8CC35 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.25□□□□□ -0.29
SynpoQ8CC35 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.24□□□□□ -0.29
SynpoQ8CC35 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Gm33320-201ENSMUST00000192232 530 ntBASIC13.24□□□□□ -0.29
SynpoQ8CC35 Gm6916-202ENSMUST00000205523 195 ntBASIC13.24□□□□□ -0.29
SynpoQ8CC35 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.24□□□□□ -0.29
SynpoQ8CC35 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.24□□□□□ -0.29
SynpoQ8CC35 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.24□□□□□ -0.29
SynpoQ8CC35 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.24□□□□□ -0.29
SynpoQ8CC35 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynpoQ8CC35 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.23□□□□□ -0.29
SynpoQ8CC35 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SynpoQ8CC35 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.23□□□□□ -0.29
SynpoQ8CC35 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SynpoQ8CC35 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SynpoQ8CC35 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SynpoQ8CC35 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SynpoQ8CC35 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SynpoQ8CC35 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SynpoQ8CC35 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SynpoQ8CC35 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SynpoQ8CC35 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SynpoQ8CC35 Gm15393-201ENSMUST00000120499 219 ntBASIC13.23□□□□□ -0.29
SynpoQ8CC35 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.23□□□□□ -0.29
SynpoQ8CC35 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SynpoQ8CC35 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.23□□□□□ -0.29
SynpoQ8CC35 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.23□□□□□ -0.29
SynpoQ8CC35 Gm8515-201ENSMUST00000194852 576 ntBASIC13.23□□□□□ -0.29
SynpoQ8CC35 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.23□□□□□ -0.29
SynpoQ8CC35 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SynpoQ8CC35 Gm7653-201ENSMUST00000214567 508 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms