Protein–RNA interactions for Protein: Q8C3X2

Ccdc90b, Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90bQ8C3X2 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.21□□□□□ -0.29
Ccdc90bQ8C3X2 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.21□□□□□ -0.29
Ccdc90bQ8C3X2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ccdc90bQ8C3X2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc90bQ8C3X2 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc90bQ8C3X2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ccdc90bQ8C3X2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc90bQ8C3X2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.21□□□□□ -0.29
Ccdc90bQ8C3X2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc90bQ8C3X2 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc90bQ8C3X2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.21□□□□□ -0.29
Ccdc90bQ8C3X2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc90bQ8C3X2 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ccdc90bQ8C3X2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.21□□□□□ -0.29
Ccdc90bQ8C3X2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc90bQ8C3X2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc90bQ8C3X2 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Ccdc90bQ8C3X2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc90bQ8C3X2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Gm13884-201ENSMUST00000118103 829 ntBASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Gm21362-201ENSMUST00000194272 928 ntBASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc90bQ8C3X2 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Gm6973-201ENSMUST00000117080 721 ntBASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Gm29741-201ENSMUST00000192667 421 ntBASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Gm17968-201ENSMUST00000194902 784 ntBASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc90bQ8C3X2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms