Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ptcd1Q8C2E4 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ptcd1Q8C2E4 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC16.8■□□□□ 0.28
Ptcd1Q8C2E4 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ptcd1Q8C2E4 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ptcd1Q8C2E4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Gm43118-201ENSMUST00000199149 775 ntBASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Gm43758-201ENSMUST00000199500 367 ntBASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ptcd1Q8C2E4 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Mir877-201ENSMUST00000104738 85 ntBASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Mir5132-201ENSMUST00000175166 71 ntBASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Gm27682-201ENSMUST00000183930 110 ntBASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Gm3786-201ENSMUST00000202659 378 ntBASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ptcd1Q8C2E4 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ptcd1Q8C2E4 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ptcd1Q8C2E4 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ptcd1Q8C2E4 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ptcd1Q8C2E4 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.77■□□□□ 0.28
Ptcd1Q8C2E4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ptcd1Q8C2E4 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ptcd1Q8C2E4 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ptcd1Q8C2E4 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ptcd1Q8C2E4 Gm8213-201ENSMUST00000118191 441 ntBASIC16.77■□□□□ 0.28
Ptcd1Q8C2E4 Gm10156-201ENSMUST00000122364 462 ntBASIC16.77■□□□□ 0.28
Ptcd1Q8C2E4 Gm26083-201ENSMUST00000157904 193 ntBASIC16.77■□□□□ 0.28
Ptcd1Q8C2E4 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Ptcd1Q8C2E4 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC16.77■□□□□ 0.28
Ptcd1Q8C2E4 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC16.77■□□□□ 0.28
Ptcd1Q8C2E4 Gm18935-201ENSMUST00000212692 664 ntBASIC16.77■□□□□ 0.28
Ptcd1Q8C2E4 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.77■□□□□ 0.28
Ptcd1Q8C2E4 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ptcd1Q8C2E4 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ptcd1Q8C2E4 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ptcd1Q8C2E4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Ptcd1Q8C2E4 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ptcd1Q8C2E4 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Ptcd1Q8C2E4 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ptcd1Q8C2E4 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ptcd1Q8C2E4 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Ptcd1Q8C2E4 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ptcd1Q8C2E4 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Ptcd1Q8C2E4 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Ptcd1Q8C2E4 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ptcd1Q8C2E4 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ptcd1Q8C2E4 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms