Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Gm9899-201ENSMUST00000065519 555 ntBASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sh3rf2Q8BZT2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Gm12742-201ENSMUST00000117326 410 ntBASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Gm12403-201ENSMUST00000121384 959 ntBASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Gm38144-201ENSMUST00000192790 465 ntBASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Gm43630-201ENSMUST00000201550 776 ntBASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.82□□□□□ -0.2
Sh3rf2Q8BZT2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Gm11803-201ENSMUST00000119966 444 ntBASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Gm27731-201ENSMUST00000185192 107 ntBASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Gm29127-201ENSMUST00000188304 517 ntBASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Gm8598-201ENSMUST00000221184 836 ntBASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Sh3rf2Q8BZT2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms