Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Gm27680-201ENSMUST00000184192 160 ntBASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trerf1Q8BXJ2 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.46□□□□□ -0.09
Trerf1Q8BXJ2 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trerf1Q8BXJ2 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trerf1Q8BXJ2 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trerf1Q8BXJ2 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trerf1Q8BXJ2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trerf1Q8BXJ2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trerf1Q8BXJ2 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trerf1Q8BXJ2 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trerf1Q8BXJ2 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.46□□□□□ -0.09
Trerf1Q8BXJ2 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trerf1Q8BXJ2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trerf1Q8BXJ2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trerf1Q8BXJ2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trerf1Q8BXJ2 Gm12428-201ENSMUST00000119844 727 ntBASIC14.46□□□□□ -0.09
Trerf1Q8BXJ2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Trerf1Q8BXJ2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trerf1Q8BXJ2 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trerf1Q8BXJ2 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trerf1Q8BXJ2 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trerf1Q8BXJ2 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trerf1Q8BXJ2 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trerf1Q8BXJ2 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Trerf1Q8BXJ2 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trerf1Q8BXJ2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trerf1Q8BXJ2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trerf1Q8BXJ2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trerf1Q8BXJ2 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.46□□□□□ -0.1
Trerf1Q8BXJ2 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trerf1Q8BXJ2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Gm15957-201ENSMUST00000118893 974 ntBASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Gm44344-201ENSMUST00000200287 129 ntBASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trerf1Q8BXJ2 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Trerf1Q8BXJ2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms