Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Gm12384-201ENSMUST00000119228 919 ntBASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Gm8810-201ENSMUST00000172895 754 ntBASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.47□□□□□ -0.09
Rd3Q8BRE0 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Gm18473-201ENSMUST00000220543 868 ntBASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.47□□□□□ -0.09
Rd3Q8BRE0 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rd3Q8BRE0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rd3Q8BRE0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rd3Q8BRE0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rd3Q8BRE0 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.46□□□□□ -0.09
Rd3Q8BRE0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Rd3Q8BRE0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rd3Q8BRE0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Rd3Q8BRE0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rd3Q8BRE0 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rd3Q8BRE0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.46□□□□□ -0.09
Rd3Q8BRE0 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rd3Q8BRE0 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rd3Q8BRE0 Gm15770-201ENSMUST00000117498 584 ntBASIC14.46□□□□□ -0.09
Rd3Q8BRE0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rd3Q8BRE0 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.46□□□□□ -0.09
Rd3Q8BRE0 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Rd3Q8BRE0 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.46□□□□□ -0.09
Rd3Q8BRE0 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rd3Q8BRE0 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.46□□□□□ -0.09
Rd3Q8BRE0 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.46□□□□□ -0.09
Rd3Q8BRE0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rd3Q8BRE0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rd3Q8BRE0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rd3Q8BRE0 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rd3Q8BRE0 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Rd3Q8BRE0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rd3Q8BRE0 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.46□□□□□ -0.1
Rd3Q8BRE0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rd3Q8BRE0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rd3Q8BRE0 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rd3Q8BRE0 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rd3Q8BRE0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.46□□□□□ -0.1
Rd3Q8BRE0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rd3Q8BRE0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.45□□□□□ -0.1
Rd3Q8BRE0 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rd3Q8BRE0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rd3Q8BRE0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rd3Q8BRE0 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.45□□□□□ -0.1
Rd3Q8BRE0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rd3Q8BRE0 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rd3Q8BRE0 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.45□□□□□ -0.1
Rd3Q8BRE0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rd3Q8BRE0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rd3Q8BRE0 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.45□□□□□ -0.1
Rd3Q8BRE0 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.45□□□□□ -0.1
Rd3Q8BRE0 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Rd3Q8BRE0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rd3Q8BRE0 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.45□□□□□ -0.1
Rd3Q8BRE0 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.45□□□□□ -0.1
Rd3Q8BRE0 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rd3Q8BRE0 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.45□□□□□ -0.1
Rd3Q8BRE0 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.45□□□□□ -0.1
Rd3Q8BRE0 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.45□□□□□ -0.1
Rd3Q8BRE0 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.45□□□□□ -0.1
Rd3Q8BRE0 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.45□□□□□ -0.1
Rd3Q8BRE0 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms