Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smco3Q8BQM7 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Smco3Q8BQM7 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Gm2272-201ENSMUST00000194903 582 ntBASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 AV026068-213ENSMUST00000223675 1171 ntBASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Smco3Q8BQM7 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Gm7153-201ENSMUST00000117092 455 ntBASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Gm5479-201ENSMUST00000160578 435 ntBASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smco3Q8BQM7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smco3Q8BQM7 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms