Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Gm22189-201ENSMUST00000103822 86 ntBASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Gm28760-201ENSMUST00000185995 736 ntBASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Gm18905-201ENSMUST00000205454 928 ntBASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Gm17795-201ENSMUST00000214505 757 ntBASIC13.95□□□□□ -0.18
Sfr1Q8BP27 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sfr1Q8BP27 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Gm7488-201ENSMUST00000117148 684 ntBASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Gm15240-201ENSMUST00000118156 720 ntBASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Gm2445-201ENSMUST00000182798 989 ntBASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sfr1Q8BP27 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sfr1Q8BP27 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sfr1Q8BP27 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sfr1Q8BP27 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Sfr1Q8BP27 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sfr1Q8BP27 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sfr1Q8BP27 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sfr1Q8BP27 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sfr1Q8BP27 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sfr1Q8BP27 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Sfr1Q8BP27 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sfr1Q8BP27 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sfr1Q8BP27 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sfr1Q8BP27 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sfr1Q8BP27 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sfr1Q8BP27 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms