Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm15653-201ENSMUST00000119247 907 ntBASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc40Q8BI79 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Gm27622-201ENSMUST00000183779 60 ntBASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Gm27430-201ENSMUST00000184585 107 ntBASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Gm44333-201ENSMUST00000197168 107 ntBASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc40Q8BI79 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Gm18027-201ENSMUST00000218947 619 ntBASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc40Q8BI79 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 127.4 ms