Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm12585-201ENSMUST00000117307 290 ntBASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Gm15393-201ENSMUST00000120499 219 ntBASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Clrn3Q8BHH8 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Pck2-205ENSMUST00000226352 2784 ntBASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Clrn3Q8BHH8 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Gm27306-201ENSMUST00000183970 107 ntBASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Gm21470-201ENSMUST00000187680 696 ntBASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms