Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Gm23984-201ENSMUST00000157139 203 ntBASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Atg4dQ8BGV9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Gm12091-201ENSMUST00000146791 830 ntBASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Gm42550-201ENSMUST00000201553 960 ntBASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Atg4dQ8BGV9 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atg4dQ8BGV9 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.71□□□□□ -0.38
Atg4dQ8BGV9 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Atg4dQ8BGV9 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atg4dQ8BGV9 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atg4dQ8BGV9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atg4dQ8BGV9 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atg4dQ8BGV9 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.71□□□□□ -0.38
Atg4dQ8BGV9 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Atg4dQ8BGV9 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Atg4dQ8BGV9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
Atg4dQ8BGV9 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4dQ8BGV9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4dQ8BGV9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4dQ8BGV9 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4dQ8BGV9 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Atg4dQ8BGV9 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Atg4dQ8BGV9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Atg4dQ8BGV9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms