Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Gm13316-201ENSMUST00000140537 691 ntBASIC11.5□□□□□ -0.57
Rif1Q6PR54 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Gm19353-201ENSMUST00000184561 445 ntBASIC11.5□□□□□ -0.57
Rif1Q6PR54 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Gm19430-201ENSMUST00000193847 2137 ntBASIC11.5□□□□□ -0.57
Rif1Q6PR54 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.5□□□□□ -0.57
Rif1Q6PR54 AC126799.1-201ENSMUST00000221976 246 ntBASIC11.5□□□□□ -0.57
Rif1Q6PR54 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.5□□□□□ -0.57
Rif1Q6PR54 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rif1Q6PR54 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Rif1Q6PR54 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.5□□□□□ -0.57
Rif1Q6PR54 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rif1Q6PR54 Gm10434-201ENSMUST00000101158 471 ntBASIC11.49□□□□□ -0.57
Rif1Q6PR54 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC11.49□□□□□ -0.57
Rif1Q6PR54 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Gm42473-201ENSMUST00000201056 2291 ntBASIC11.49□□□□□ -0.57
Rif1Q6PR54 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.49□□□□□ -0.57
Rif1Q6PR54 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Gm12029-201ENSMUST00000120073 832 ntBASIC11.49□□□□□ -0.57
Rif1Q6PR54 Gm12969-201ENSMUST00000120199 1004 ntBASIC11.49□□□□□ -0.57
Rif1Q6PR54 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.49□□□□□ -0.57
Rif1Q6PR54 Gm5950-201ENSMUST00000213337 772 ntBASIC11.49□□□□□ -0.57
Rif1Q6PR54 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.49□□□□□ -0.57
Rif1Q6PR54 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rif1Q6PR54 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Gm15957-201ENSMUST00000118893 974 ntBASIC11.48□□□□□ -0.57
Rif1Q6PR54 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Gm31256-201ENSMUST00000194705 506 ntBASIC11.48□□□□□ -0.57
Rif1Q6PR54 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Gm8385-201ENSMUST00000058999 643 ntBASIC11.48□□□□□ -0.57
Rif1Q6PR54 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rif1Q6PR54 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms