Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Gm5364-201ENSMUST00000216789 889 ntBASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scaf4Q6PFF0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Gm1401-201ENSMUST00000122048 772 ntBASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scaf4Q6PFF0 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.46□□□□□ -0.25
Scaf4Q6PFF0 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scaf4Q6PFF0 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scaf4Q6PFF0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Scaf4Q6PFF0 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Scaf4Q6PFF0 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Scaf4Q6PFF0 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.46□□□□□ -0.25
Scaf4Q6PFF0 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scaf4Q6PFF0 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Scaf4Q6PFF0 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.46□□□□□ -0.25
Scaf4Q6PFF0 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Scaf4Q6PFF0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.46□□□□□ -0.25
Scaf4Q6PFF0 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Scaf4Q6PFF0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.46□□□□□ -0.25
Scaf4Q6PFF0 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC13.46□□□□□ -0.25
Scaf4Q6PFF0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Scaf4Q6PFF0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Scaf4Q6PFF0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Scaf4Q6PFF0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Scaf4Q6PFF0 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Scaf4Q6PFF0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Scaf4Q6PFF0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Scaf4Q6PFF0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Scaf4Q6PFF0 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Scaf4Q6PFF0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Scaf4Q6PFF0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Scaf4Q6PFF0 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Scaf4Q6PFF0 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Scaf4Q6PFF0 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms