Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Gm2272-201ENSMUST00000194903 582 ntBASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.94□□□□□ -0.34
Rnf220Q6PDX6 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Gm27300-201ENSMUST00000184085 97 ntBASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Gm27335-201ENSMUST00000184758 97 ntBASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Gm28659-201ENSMUST00000188013 759 ntBASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf220Q6PDX6 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms