Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Slx4Q6P1D7 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Slx4Q6P1D7 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slx4Q6P1D7 n-R5s77-201ENSMUST00000083757 119 ntBASIC20.66■□□□□ 0.9
Slx4Q6P1D7 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Slx4Q6P1D7 Gm4366-201ENSMUST00000201488 1342 ntBASIC20.66■□□□□ 0.9
Slx4Q6P1D7 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Slx4Q6P1D7 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Slx4Q6P1D7 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Slx4Q6P1D7 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Slx4Q6P1D7 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Slx4Q6P1D7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slx4Q6P1D7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slx4Q6P1D7 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC20.65■□□□□ 0.9
Slx4Q6P1D7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slx4Q6P1D7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Slx4Q6P1D7 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slx4Q6P1D7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Slx4Q6P1D7 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC20.65■□□□□ 0.9
Slx4Q6P1D7 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC20.65■□□□□ 0.9
Slx4Q6P1D7 Gm19208-201ENSMUST00000213861 912 ntBASIC20.65■□□□□ 0.9
Slx4Q6P1D7 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slx4Q6P1D7 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slx4Q6P1D7 Gm19221-201ENSMUST00000221827 1477 ntBASIC20.65■□□□□ 0.9
Slx4Q6P1D7 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Slx4Q6P1D7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slx4Q6P1D7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slx4Q6P1D7 AC139350.1-201ENSMUST00000227064 1594 ntBASIC20.65■□□□□ 0.9
Slx4Q6P1D7 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Slx4Q6P1D7 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slx4Q6P1D7 Gm29340-201ENSMUST00000188763 3854 ntBASIC20.65■□□□□ 0.9
Slx4Q6P1D7 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC20.64■□□□□ 0.9
Slx4Q6P1D7 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Slx4Q6P1D7 Gm15897-201ENSMUST00000117770 1486 ntBASIC20.64■□□□□ 0.9
Slx4Q6P1D7 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
Slx4Q6P1D7 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC20.64■□□□□ 0.9
Slx4Q6P1D7 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC20.64■□□□□ 0.9
Slx4Q6P1D7 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC20.64■□□□□ 0.9
Slx4Q6P1D7 Gm7899-201ENSMUST00000192935 1897 ntBASIC20.64■□□□□ 0.9
Slx4Q6P1D7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Slx4Q6P1D7 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Slx4Q6P1D7 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Slx4Q6P1D7 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC20.64■□□□□ 0.9
Slx4Q6P1D7 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Slx4Q6P1D7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slx4Q6P1D7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Slx4Q6P1D7 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slx4Q6P1D7 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slx4Q6P1D7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slx4Q6P1D7 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slx4Q6P1D7 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Slx4Q6P1D7 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Slx4Q6P1D7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Slx4Q6P1D7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slx4Q6P1D7 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC20.63■□□□□ 0.89
Slx4Q6P1D7 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Slx4Q6P1D7 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slx4Q6P1D7 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slx4Q6P1D7 Gm8546-201ENSMUST00000178288 1264 ntBASIC20.63■□□□□ 0.89
Slx4Q6P1D7 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Slx4Q6P1D7 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slx4Q6P1D7 Gm18556-201ENSMUST00000219748 1031 ntBASIC20.63■□□□□ 0.89
Slx4Q6P1D7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slx4Q6P1D7 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC20.63■□□□□ 0.89
Slx4Q6P1D7 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slx4Q6P1D7 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC20.63■□□□□ 0.89
Slx4Q6P1D7 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slx4Q6P1D7 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slx4Q6P1D7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slx4Q6P1D7 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slx4Q6P1D7 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slx4Q6P1D7 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slx4Q6P1D7 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slx4Q6P1D7 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC20.63■□□□□ 0.89
Slx4Q6P1D7 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slx4Q6P1D7 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slx4Q6P1D7 Gm5950-201ENSMUST00000213337 772 ntBASIC20.63■□□□□ 0.89
Slx4Q6P1D7 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slx4Q6P1D7 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slx4Q6P1D7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Slx4Q6P1D7 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slx4Q6P1D7 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slx4Q6P1D7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Slx4Q6P1D7 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slx4Q6P1D7 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slx4Q6P1D7 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slx4Q6P1D7 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slx4Q6P1D7 AC101945.2-201ENSMUST00000227886 1377 ntBASIC20.62■□□□□ 0.89
Slx4Q6P1D7 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slx4Q6P1D7 Gm9083-201ENSMUST00000120423 819 ntBASIC20.62■□□□□ 0.89
Slx4Q6P1D7 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC20.62■□□□□ 0.89
Slx4Q6P1D7 Gm13461-201ENSMUST00000120980 662 ntBASIC20.62■□□□□ 0.89
Slx4Q6P1D7 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC20.62■□□□□ 0.89
Slx4Q6P1D7 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slx4Q6P1D7 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC20.62■□□□□ 0.89
Slx4Q6P1D7 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Slx4Q6P1D7 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slx4Q6P1D7 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC20.62■□□□□ 0.89
Slx4Q6P1D7 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC20.62■□□□□ 0.89
Slx4Q6P1D7 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms