Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.53□□□□□ -0.4
VcanQ62059 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcanQ62059 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.4
VcanQ62059 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
VcanQ62059 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
VcanQ62059 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.52□□□□□ -0.4
VcanQ62059 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.52□□□□□ -0.4
VcanQ62059 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.52□□□□□ -0.4
VcanQ62059 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VcanQ62059 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
VcanQ62059 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
VcanQ62059 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VcanQ62059 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
VcanQ62059 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VcanQ62059 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VcanQ62059 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VcanQ62059 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.52□□□□□ -0.41
VcanQ62059 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VcanQ62059 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VcanQ62059 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VcanQ62059 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
VcanQ62059 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VcanQ62059 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VcanQ62059 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VcanQ62059 Gm13611-201ENSMUST00000118269 318 ntBASIC12.52□□□□□ -0.41
VcanQ62059 Gm26361-201ENSMUST00000158868 186 ntBASIC12.52□□□□□ -0.41
VcanQ62059 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VcanQ62059 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
VcanQ62059 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
VcanQ62059 Gm5781-201ENSMUST00000219792 443 ntBASIC12.52□□□□□ -0.41
VcanQ62059 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VcanQ62059 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.52□□□□□ -0.41
VcanQ62059 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VcanQ62059 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VcanQ62059 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VcanQ62059 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VcanQ62059 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VcanQ62059 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VcanQ62059 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.52□□□□□ -0.41
VcanQ62059 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VcanQ62059 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
VcanQ62059 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
VcanQ62059 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
VcanQ62059 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VcanQ62059 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
VcanQ62059 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.51□□□□□ -0.41
VcanQ62059 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.51□□□□□ -0.41
VcanQ62059 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
VcanQ62059 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcanQ62059 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcanQ62059 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcanQ62059 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.51□□□□□ -0.41
VcanQ62059 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.51□□□□□ -0.41
VcanQ62059 Gm24749-201ENSMUST00000157838 343 ntBASIC12.51□□□□□ -0.41
VcanQ62059 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
VcanQ62059 Gm23153-201ENSMUST00000175323 313 ntBASIC12.51□□□□□ -0.41
VcanQ62059 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VcanQ62059 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VcanQ62059 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
VcanQ62059 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VcanQ62059 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcanQ62059 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcanQ62059 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
VcanQ62059 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcanQ62059 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.51□□□□□ -0.41
VcanQ62059 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VcanQ62059 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcanQ62059 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VcanQ62059 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcanQ62059 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
VcanQ62059 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.51□□□□□ -0.41
VcanQ62059 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcanQ62059 Gm2231-201ENSMUST00000125661 612 ntBASIC12.51□□□□□ -0.41
VcanQ62059 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.51□□□□□ -0.41
VcanQ62059 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
VcanQ62059 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcanQ62059 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.51□□□□□ -0.41
VcanQ62059 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcanQ62059 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VcanQ62059 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
VcanQ62059 Gm13996-201ENSMUST00000118456 430 ntBASIC12.5□□□□□ -0.41
VcanQ62059 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.5□□□□□ -0.41
VcanQ62059 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
VcanQ62059 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VcanQ62059 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VcanQ62059 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
VcanQ62059 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
VcanQ62059 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
VcanQ62059 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VcanQ62059 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.5□□□□□ -0.41
VcanQ62059 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.5□□□□□ -0.41
VcanQ62059 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
VcanQ62059 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VcanQ62059 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.5□□□□□ -0.41
VcanQ62059 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.5□□□□□ -0.41
VcanQ62059 Gm6722-201ENSMUST00000221586 390 ntBASIC12.5□□□□□ -0.41
VcanQ62059 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.5□□□□□ -0.41
VcanQ62059 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VcanQ62059 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
VcanQ62059 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms