Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a4Q60857 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a4Q60857 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.98□□□□□ -0.17
Slc6a4Q60857 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a4Q60857 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a4Q60857 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a4Q60857 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a4Q60857 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.97□□□□□ -0.17
Slc6a4Q60857 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a4Q60857 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a4Q60857 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a4Q60857 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a4Q60857 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a4Q60857 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a4Q60857 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a4Q60857 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Slc6a4Q60857 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a4Q60857 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.97□□□□□ -0.17
Slc6a4Q60857 Gm8652-201ENSMUST00000181363 964 ntBASIC13.97□□□□□ -0.17
Slc6a4Q60857 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.97□□□□□ -0.17
Slc6a4Q60857 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.97□□□□□ -0.17
Slc6a4Q60857 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a4Q60857 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a4Q60857 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a4Q60857 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a4Q60857 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a4Q60857 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a4Q60857 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Slc6a4Q60857 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a4Q60857 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a4Q60857 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
Slc6a4Q60857 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Gm44719-201ENSMUST00000206404 149 ntBASIC13.96□□□□□ -0.17
Slc6a4Q60857 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a4Q60857 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a4Q60857 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.96□□□□□ -0.18
Slc6a4Q60857 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Slc6a4Q60857 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Slc6a4Q60857 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Slc6a4Q60857 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Slc6a4Q60857 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Slc6a4Q60857 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Slc6a4Q60857 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Slc6a4Q60857 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Slc6a4Q60857 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.95□□□□□ -0.18
Slc6a4Q60857 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a4Q60857 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.95□□□□□ -0.18
Slc6a4Q60857 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Gm38671-201ENSMUST00000200573 130 ntBASIC13.95□□□□□ -0.18
Slc6a4Q60857 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a4Q60857 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms