Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nr1h4Q60641 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.03□□□□□ -0.32
Nr1h4Q60641 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nr1h4Q60641 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nr1h4Q60641 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nr1h4Q60641 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nr1h4Q60641 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Nr1h4Q60641 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nr1h4Q60641 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nr1h4Q60641 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nr1h4Q60641 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nr1h4Q60641 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nr1h4Q60641 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nr1h4Q60641 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nr1h4Q60641 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.02□□□□□ -0.32
Nr1h4Q60641 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.02□□□□□ -0.32
Nr1h4Q60641 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Nr1h4Q60641 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nr1h4Q60641 Gm18049-201ENSMUST00000208909 581 ntBASIC13.02□□□□□ -0.33
Nr1h4Q60641 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.02□□□□□ -0.33
Nr1h4Q60641 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.02□□□□□ -0.33
Nr1h4Q60641 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Nr1h4Q60641 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Nr1h4Q60641 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nr1h4Q60641 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Nr1h4Q60641 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nr1h4Q60641 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.02□□□□□ -0.33
Nr1h4Q60641 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nr1h4Q60641 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.02□□□□□ -0.33
Nr1h4Q60641 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nr1h4Q60641 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.02□□□□□ -0.33
Nr1h4Q60641 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Nr1h4Q60641 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.02□□□□□ -0.33
Nr1h4Q60641 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.02□□□□□ -0.33
Nr1h4Q60641 Grk6-205ENSMUST00000224653 2976 ntBASIC13.02□□□□□ -0.33
Nr1h4Q60641 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nr1h4Q60641 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nr1h4Q60641 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.01□□□□□ -0.33
Nr1h4Q60641 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.01□□□□□ -0.33
Nr1h4Q60641 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.01□□□□□ -0.33
Nr1h4Q60641 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.01□□□□□ -0.33
Nr1h4Q60641 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Gm27631-201ENSMUST00000184163 466 ntBASIC13.01□□□□□ -0.33
Nr1h4Q60641 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.01□□□□□ -0.33
Nr1h4Q60641 Gm37714-201ENSMUST00000194742 342 ntBASIC13.01□□□□□ -0.33
Nr1h4Q60641 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.01□□□□□ -0.33
Nr1h4Q60641 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Mir125a-201ENSMUST00000083545 68 ntBASIC13.01□□□□□ -0.33
Nr1h4Q60641 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Nr1h4Q60641 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nr1h4Q60641 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms