Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim38Q5SZ99 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim38Q5SZ99 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim38Q5SZ99 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Mir6956-201ENSMUST00000183598 62 ntBASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Gm18905-201ENSMUST00000205454 928 ntBASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim38Q5SZ99 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Gm27772-201ENSMUST00000184900 187 ntBASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim38Q5SZ99 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms