Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Gm37584-201ENSMUST00000193595 1290 ntBASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Gm7787-201ENSMUST00000216858 688 ntBASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Gm6296-201ENSMUST00000222599 943 ntBASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3-3Q5R1C3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Gm37153-201ENSMUST00000193637 231 ntBASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3-3Q5R1C3 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Gm7222-201ENSMUST00000117512 906 ntBASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Gm11764-201ENSMUST00000120221 623 ntBASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC10.23□□□□□ -0.77
Trav3-3Q5R1C3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms