Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Rn7s6-201ENSMUST00000175005 291 ntBASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Gm16372-201ENSMUST00000073088 450 ntBASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps13aQ5H8C4 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Gm5070-201ENSMUST00000177599 862 ntBASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Acot6-202ENSMUST00000222921 3622 ntBASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.22□□□□□ -0.29
Vps13aQ5H8C4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps13aQ5H8C4 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps13aQ5H8C4 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps13aQ5H8C4 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps13aQ5H8C4 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Vps13aQ5H8C4 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.21□□□□□ -0.29
Vps13aQ5H8C4 Gm23218-201ENSMUST00000158124 276 ntBASIC13.21□□□□□ -0.29
Vps13aQ5H8C4 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Vps13aQ5H8C4 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps13aQ5H8C4 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.21□□□□□ -0.29
Vps13aQ5H8C4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.21□□□□□ -0.29
Vps13aQ5H8C4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps13aQ5H8C4 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.21□□□□□ -0.29
Vps13aQ5H8C4 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps13aQ5H8C4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps13aQ5H8C4 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps13aQ5H8C4 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps13aQ5H8C4 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.21□□□□□ -0.29
Vps13aQ5H8C4 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Vps13aQ5H8C4 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Vps13aQ5H8C4 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.21□□□□□ -0.3
Vps13aQ5H8C4 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Vps13aQ5H8C4 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vps13aQ5H8C4 Gm18734-201ENSMUST00000172937 808 ntBASIC13.21□□□□□ -0.3
Vps13aQ5H8C4 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.21□□□□□ -0.3
Vps13aQ5H8C4 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Vps13aQ5H8C4 Gm44405-201ENSMUST00000198952 126 ntBASIC13.21□□□□□ -0.3
Vps13aQ5H8C4 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC13.21□□□□□ -0.3
Vps13aQ5H8C4 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Vps13aQ5H8C4 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vps13aQ5H8C4 Daam2-202ENSMUST00000224595 1926 ntBASIC13.21□□□□□ -0.3
Vps13aQ5H8C4 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vps13aQ5H8C4 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vps13aQ5H8C4 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Vps13aQ5H8C4 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.21□□□□□ -0.3
Vps13aQ5H8C4 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vps13aQ5H8C4 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps13aQ5H8C4 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps13aQ5H8C4 Gm16397-201ENSMUST00000122201 494 ntBASIC13.2□□□□□ -0.3
Vps13aQ5H8C4 Gm43916-201ENSMUST00000205062 967 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms