Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Gm12134-201ENSMUST00000122109 520 ntBASIC15.89■□□□□ 0.13
Ddx49Q4FZF3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.89■□□□□ 0.13
Ddx49Q4FZF3 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC15.89■□□□□ 0.13
Ddx49Q4FZF3 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ddx49Q4FZF3 Gm4271-201ENSMUST00000174444 973 ntBASIC15.89■□□□□ 0.13
Ddx49Q4FZF3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.89■□□□□ 0.13
Ddx49Q4FZF3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx49Q4FZF3 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx49Q4FZF3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx49Q4FZF3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx49Q4FZF3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.89■□□□□ 0.13
Ddx49Q4FZF3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx49Q4FZF3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ddx49Q4FZF3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ddx49Q4FZF3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx49Q4FZF3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx49Q4FZF3 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx49Q4FZF3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx49Q4FZF3 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx49Q4FZF3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx49Q4FZF3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx49Q4FZF3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx49Q4FZF3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx49Q4FZF3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 Gm13342-201ENSMUST00000121055 207 ntBASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 Gm24447-201ENSMUST00000083977 338 ntBASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx49Q4FZF3 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.86■□□□□ 0.13
Ddx49Q4FZF3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx49Q4FZF3 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx49Q4FZF3 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx49Q4FZF3 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx49Q4FZF3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx49Q4FZF3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Ddx49Q4FZF3 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx49Q4FZF3 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Ddx49Q4FZF3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.86■□□□□ 0.13
Ddx49Q4FZF3 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx49Q4FZF3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx49Q4FZF3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx49Q4FZF3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Ddx49Q4FZF3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.86■□□□□ 0.13
Ddx49Q4FZF3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx49Q4FZF3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx49Q4FZF3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms