Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nhlrc4Q3UP44 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nhlrc4Q3UP44 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nhlrc4Q3UP44 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nhlrc4Q3UP44 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nhlrc4Q3UP44 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nhlrc4Q3UP44 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nhlrc4Q3UP44 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nhlrc4Q3UP44 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nhlrc4Q3UP44 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Gm37917-201ENSMUST00000194711 392 ntBASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Gm18624-201ENSMUST00000220966 658 ntBASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Gm17330-201ENSMUST00000221047 165 ntBASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Gm19220-201ENSMUST00000222682 803 ntBASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.55□□□□□ -0.4
Nhlrc4Q3UP44 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nhlrc4Q3UP44 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms