Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Gm27501-201ENSMUST00000183599 107 ntBASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Gm45930-201ENSMUST00000221330 292 ntBASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Upf3aQ3ULJ3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upf3aQ3ULJ3 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Upf3aQ3ULJ3 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.31□□□□□ -0.12
Upf3aQ3ULJ3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Upf3aQ3ULJ3 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upf3aQ3ULJ3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Upf3aQ3ULJ3 Gm11618-201ENSMUST00000117946 267 ntBASIC14.31□□□□□ -0.12
Upf3aQ3ULJ3 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.31□□□□□ -0.12
Upf3aQ3ULJ3 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Upf3aQ3ULJ3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.31□□□□□ -0.12
Upf3aQ3ULJ3 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upf3aQ3ULJ3 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upf3aQ3ULJ3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Upf3aQ3ULJ3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upf3aQ3ULJ3 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.31□□□□□ -0.12
Upf3aQ3ULJ3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upf3aQ3ULJ3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Upf3aQ3ULJ3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upf3aQ3ULJ3 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upf3aQ3ULJ3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upf3aQ3ULJ3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Gm7029-201ENSMUST00000173226 450 ntBASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Upf3aQ3ULJ3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms