Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Mir1901-201ENSMUST00000122616 78 ntBASIC12.47□□□□□ -0.41
Spg11Q3UHA3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Gm23153-201ENSMUST00000175323 313 ntBASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Gm29741-201ENSMUST00000192667 421 ntBASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Spg11Q3UHA3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
Spg11Q3UHA3 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Gm8492-201ENSMUST00000182375 987 ntBASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Spg11Q3UHA3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Spg11Q3UHA3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Spg11Q3UHA3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Spg11Q3UHA3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Spg11Q3UHA3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Spg11Q3UHA3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Spg11Q3UHA3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Spg11Q3UHA3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Spg11Q3UHA3 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Spg11Q3UHA3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Spg11Q3UHA3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Spg11Q3UHA3 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Spg11Q3UHA3 Gm12165-201ENSMUST00000117047 342 ntBASIC12.46□□□□□ -0.42
Spg11Q3UHA3 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.46□□□□□ -0.42
Spg11Q3UHA3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Spg11Q3UHA3 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Spg11Q3UHA3 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Spg11Q3UHA3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Spg11Q3UHA3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Spg11Q3UHA3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Spg11Q3UHA3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Gm11930-201ENSMUST00000117788 190 ntBASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Gm12403-201ENSMUST00000121384 959 ntBASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Gm37666-201ENSMUST00000194110 866 ntBASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Gm43610-201ENSMUST00000199117 365 ntBASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Gm18730-201ENSMUST00000218038 343 ntBASIC12.45□□□□□ -0.42
Spg11Q3UHA3 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.45□□□□□ -0.42
Spg11Q3UHA3 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms