Protein–RNA interactions for Protein: Q08874

Mitf, Microphthalmia-associated transcription factor, mousemouse

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MitfQ08874 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.64□□□□□ -0.39
MitfQ08874 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.64□□□□□ -0.39
MitfQ08874 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.64□□□□□ -0.39
MitfQ08874 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
MitfQ08874 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
MitfQ08874 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
MitfQ08874 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
MitfQ08874 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.64□□□□□ -0.39
MitfQ08874 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.64□□□□□ -0.39
MitfQ08874 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
MitfQ08874 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MitfQ08874 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MitfQ08874 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
MitfQ08874 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MitfQ08874 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
MitfQ08874 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
MitfQ08874 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.63□□□□□ -0.39
MitfQ08874 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MitfQ08874 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MitfQ08874 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
MitfQ08874 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
MitfQ08874 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
MitfQ08874 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.63□□□□□ -0.39
MitfQ08874 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
MitfQ08874 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MitfQ08874 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.63□□□□□ -0.39
MitfQ08874 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.63□□□□□ -0.39
MitfQ08874 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.63□□□□□ -0.39
MitfQ08874 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
MitfQ08874 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.63□□□□□ -0.39
MitfQ08874 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.63□□□□□ -0.39
MitfQ08874 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.63□□□□□ -0.39
MitfQ08874 Gm17968-201ENSMUST00000194902 784 ntBASIC12.63□□□□□ -0.39
MitfQ08874 Gm44608-201ENSMUST00000206827 855 ntBASIC12.63□□□□□ -0.39
MitfQ08874 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.63□□□□□ -0.39
MitfQ08874 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
MitfQ08874 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.63□□□□□ -0.39
MitfQ08874 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.63□□□□□ -0.39
MitfQ08874 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
MitfQ08874 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
MitfQ08874 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
MitfQ08874 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
MitfQ08874 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
MitfQ08874 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
MitfQ08874 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
MitfQ08874 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
MitfQ08874 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
MitfQ08874 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
MitfQ08874 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
MitfQ08874 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
MitfQ08874 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
MitfQ08874 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.62□□□□□ -0.39
MitfQ08874 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
MitfQ08874 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
MitfQ08874 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
MitfQ08874 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
MitfQ08874 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
MitfQ08874 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms