Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1bP97952 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Scn1bP97952 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1bP97952 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1bP97952 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1bP97952 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1bP97952 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.48□□□□□ -0.41
Scn1bP97952 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1bP97952 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1bP97952 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1bP97952 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Scn1bP97952 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Scn1bP97952 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1bP97952 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.48□□□□□ -0.41
Scn1bP97952 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1bP97952 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.48□□□□□ -0.41
Scn1bP97952 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1bP97952 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1bP97952 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.48□□□□□ -0.41
Scn1bP97952 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Scn1bP97952 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1bP97952 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1bP97952 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1bP97952 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1bP97952 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Scn1bP97952 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1bP97952 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1bP97952 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1bP97952 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1bP97952 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Scn1bP97952 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1bP97952 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1bP97952 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.48□□□□□ -0.41
Scn1bP97952 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Scn1bP97952 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.47□□□□□ -0.41
Scn1bP97952 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.47□□□□□ -0.41
Scn1bP97952 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.47□□□□□ -0.41
Scn1bP97952 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Scn1bP97952 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
Scn1bP97952 Gm27628-201ENSMUST00000184911 107 ntBASIC12.47□□□□□ -0.41
Scn1bP97952 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
Scn1bP97952 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.47□□□□□ -0.41
Scn1bP97952 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.47□□□□□ -0.41
Scn1bP97952 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Scn1bP97952 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Scn1bP97952 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
Scn1bP97952 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
Scn1bP97952 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn1bP97952 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.47□□□□□ -0.41
Scn1bP97952 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Scn1bP97952 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1bP97952 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Scn1bP97952 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1bP97952 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1bP97952 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1bP97952 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1bP97952 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1bP97952 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.46□□□□□ -0.41
Scn1bP97952 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1bP97952 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.46□□□□□ -0.41
Scn1bP97952 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.46□□□□□ -0.41
Scn1bP97952 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.46□□□□□ -0.41
Scn1bP97952 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1bP97952 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.46□□□□□ -0.41
Scn1bP97952 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.46□□□□□ -0.41
Scn1bP97952 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1bP97952 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1bP97952 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1bP97952 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Scn1bP97952 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1bP97952 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1bP97952 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1bP97952 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn1bP97952 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms