Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nkx3-2P97503 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Nkx3-2P97503 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.93□□□□□ -0.34
Nkx3-2P97503 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.93□□□□□ -0.34
Nkx3-2P97503 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.93□□□□□ -0.34
Nkx3-2P97503 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nkx3-2P97503 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Gm13385-201ENSMUST00000121089 220 ntBASIC12.92□□□□□ -0.34
Nkx3-2P97503 Gm11918-201ENSMUST00000121660 179 ntBASIC12.92□□□□□ -0.34
Nkx3-2P97503 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Gm9002-201ENSMUST00000178437 499 ntBASIC12.92□□□□□ -0.34
Nkx3-2P97503 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.92□□□□□ -0.34
Nkx3-2P97503 Gm18187-201ENSMUST00000196476 984 ntBASIC12.92□□□□□ -0.34
Nkx3-2P97503 Gm44487-201ENSMUST00000205145 325 ntBASIC12.92□□□□□ -0.34
Nkx3-2P97503 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.92□□□□□ -0.34
Nkx3-2P97503 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Nkx3-2P97503 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nkx3-2P97503 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms