Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Gm9387-201ENSMUST00000098624 1320 ntBASIC9.05□□□□□ -0.96
PrkdcP97313 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
PrkdcP97313 Gm12948-201ENSMUST00000119406 682 ntBASIC9.05□□□□□ -0.96
PrkdcP97313 Gm15595-201ENSMUST00000120840 961 ntBASIC9.05□□□□□ -0.96
PrkdcP97313 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Gm7902-201ENSMUST00000198842 947 ntBASIC9.05□□□□□ -0.96
PrkdcP97313 Gm43778-201ENSMUST00000199438 199 ntBASIC9.05□□□□□ -0.96
PrkdcP97313 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC9.05□□□□□ -0.96
PrkdcP97313 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
PrkdcP97313 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
PrkdcP97313 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC9.05□□□□□ -0.96
PrkdcP97313 Gm5616-201ENSMUST00000165252 384 ntBASIC9.05□□□□□ -0.96
PrkdcP97313 Gm8741-201ENSMUST00000174736 384 ntBASIC9.05□□□□□ -0.96
PrkdcP97313 Gm44329-201ENSMUST00000197469 112 ntBASIC9.05□□□□□ -0.96
PrkdcP97313 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC9.05□□□□□ -0.96
PrkdcP97313 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
PrkdcP97313 Gm13812-201ENSMUST00000118061 1347 ntBASIC9.04□□□□□ -0.96
PrkdcP97313 Gm13810-201ENSMUST00000118584 1347 ntBASIC9.04□□□□□ -0.96
PrkdcP97313 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
PrkdcP97313 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC9.04□□□□□ -0.96
PrkdcP97313 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.04□□□□□ -0.96
PrkdcP97313 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
PrkdcP97313 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC9.04□□□□□ -0.96
PrkdcP97313 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Gm45691-201ENSMUST00000206905 1120 ntBASIC9.04□□□□□ -0.96
PrkdcP97313 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
PrkdcP97313 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
PrkdcP97313 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
PrkdcP97313 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC9.04□□□□□ -0.96
PrkdcP97313 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC9.04□□□□□ -0.96
PrkdcP97313 AC173210.1-201ENSMUST00000222341 1131 ntBASIC9.04□□□□□ -0.96
PrkdcP97313 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Gm43509-201ENSMUST00000196551 2594 ntBASIC9.04□□□□□ -0.96
PrkdcP97313 Gm14371-201ENSMUST00000138925 1518 ntBASIC9.04□□□□□ -0.96
PrkdcP97313 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Gm43548-201ENSMUST00000197139 2353 ntBASIC9.04□□□□□ -0.96
PrkdcP97313 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
PrkdcP97313 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC9.04□□□□□ -0.96
PrkdcP97313 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC9.04□□□□□ -0.96
PrkdcP97313 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC9.04□□□□□ -0.96
PrkdcP97313 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
PrkdcP97313 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
PrkdcP97313 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
PrkdcP97313 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PrkdcP97313 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
PrkdcP97313 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
PrkdcP97313 Gm43520-201ENSMUST00000197996 164 ntBASIC9.03□□□□□ -0.96
PrkdcP97313 Gm45598-202ENSMUST00000210719 986 ntBASIC9.03□□□□□ -0.96
PrkdcP97313 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
PrkdcP97313 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms