Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43cP86449 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43cP86449 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43cP86449 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.86□□□□□ -0.03
Trim43cP86449 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43cP86449 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43cP86449 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43cP86449 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43cP86449 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43cP86449 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim43cP86449 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Trim43cP86449 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim43cP86449 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43cP86449 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43cP86449 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43cP86449 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43cP86449 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43cP86449 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trim43cP86449 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43cP86449 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43cP86449 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43cP86449 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trim43cP86449 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.85□□□□□ -0.03
Trim43cP86449 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43cP86449 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43cP86449 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.85□□□□□ -0.03
Trim43cP86449 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim43cP86449 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trim43cP86449 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim43cP86449 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.85□□□□□ -0.03
Trim43cP86449 Gm44855-201ENSMUST00000205725 362 ntBASIC14.85□□□□□ -0.03
Trim43cP86449 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.85□□□□□ -0.03
Trim43cP86449 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43cP86449 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43cP86449 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43cP86449 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43cP86449 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43cP86449 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43cP86449 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43cP86449 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trim43cP86449 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.85□□□□□ -0.03
Trim43cP86449 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim43cP86449 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trim43cP86449 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43cP86449 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trim43cP86449 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43cP86449 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43cP86449 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.84□□□□□ -0.03
Trim43cP86449 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.84□□□□□ -0.03
Trim43cP86449 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.84□□□□□ -0.03
Trim43cP86449 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trim43cP86449 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trim43cP86449 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43cP86449 Gm14057-201ENSMUST00000120631 482 ntBASIC14.84□□□□□ -0.03
Trim43cP86449 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.84□□□□□ -0.03
Trim43cP86449 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43cP86449 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43cP86449 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.84□□□□□ -0.03
Trim43cP86449 Gm27437-201ENSMUST00000183429 107 ntBASIC14.84□□□□□ -0.03
Trim43cP86449 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43cP86449 Gm5161-201ENSMUST00000075243 853 ntBASIC14.84□□□□□ -0.03
Trim43cP86449 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43cP86449 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43cP86449 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43cP86449 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43cP86449 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43cP86449 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43cP86449 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trim43cP86449 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trim43cP86449 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43cP86449 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43cP86449 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43cP86449 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim43cP86449 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim43cP86449 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim43cP86449 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trim43cP86449 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trim43cP86449 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43cP86449 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43cP86449 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43cP86449 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trim43cP86449 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43cP86449 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trim43cP86449 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Trim43cP86449 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.83□□□□□ -0.04
Trim43cP86449 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Trim43cP86449 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43cP86449 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43cP86449 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Trim43cP86449 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Trim43cP86449 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43cP86449 Gm17330-201ENSMUST00000221047 165 ntBASIC14.83□□□□□ -0.04
Trim43cP86449 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43cP86449 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43cP86449 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trim43cP86449 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.83□□□□□ -0.04
Trim43cP86449 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43cP86449 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43cP86449 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43cP86449 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms