Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trim43bP86448 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim43bP86448 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43bP86448 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trim43bP86448 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trim43bP86448 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43bP86448 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Trim43bP86448 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43bP86448 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.08□□□□□ -0.16
Trim43bP86448 Gm28630-201ENSMUST00000187806 498 ntBASIC14.08□□□□□ -0.16
Trim43bP86448 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim43bP86448 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43bP86448 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim43bP86448 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim43bP86448 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim43bP86448 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim43bP86448 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43bP86448 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43bP86448 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.08□□□□□ -0.16
Trim43bP86448 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43bP86448 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43bP86448 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43bP86448 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43bP86448 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43bP86448 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43bP86448 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43bP86448 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trim43bP86448 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43bP86448 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43bP86448 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43bP86448 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43bP86448 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.07□□□□□ -0.16
Trim43bP86448 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim43bP86448 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trim43bP86448 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43bP86448 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim43bP86448 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43bP86448 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43bP86448 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trim43bP86448 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43bP86448 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43bP86448 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43bP86448 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim43bP86448 Gm27618-201ENSMUST00000183671 60 ntBASIC14.07□□□□□ -0.16
Trim43bP86448 Mir8102-201ENSMUST00000184148 139 ntBASIC14.07□□□□□ -0.16
Trim43bP86448 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.07□□□□□ -0.16
Trim43bP86448 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43bP86448 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43bP86448 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43bP86448 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43bP86448 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.07□□□□□ -0.16
Trim43bP86448 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.07□□□□□ -0.16
Trim43bP86448 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43bP86448 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43bP86448 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43bP86448 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.07□□□□□ -0.16
Trim43bP86448 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43bP86448 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43bP86448 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43bP86448 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43bP86448 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trim43bP86448 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43bP86448 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim43bP86448 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43bP86448 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43bP86448 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim43bP86448 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43bP86448 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim43bP86448 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43bP86448 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.06□□□□□ -0.16
Trim43bP86448 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43bP86448 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43bP86448 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43bP86448 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43bP86448 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trim43bP86448 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43bP86448 Gm9719-201ENSMUST00000162765 543 ntBASIC14.06□□□□□ -0.16
Trim43bP86448 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43bP86448 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43bP86448 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43bP86448 Mir7684-201ENSMUST00000183858 60 ntBASIC14.06□□□□□ -0.16
Trim43bP86448 Gm7063-201ENSMUST00000186840 981 ntBASIC14.06□□□□□ -0.16
Trim43bP86448 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim43bP86448 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43bP86448 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43bP86448 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43bP86448 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43bP86448 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43bP86448 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim43bP86448 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43bP86448 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43bP86448 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43bP86448 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.06□□□□□ -0.16
Trim43bP86448 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.06□□□□□ -0.16
Trim43bP86448 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43bP86448 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.06□□□□□ -0.16
Trim43bP86448 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Trim43bP86448 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.06□□□□□ -0.16
Trim43bP86448 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trim43bP86448 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms