Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hist1h3bP84228 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Gm6912-201ENSMUST00000117218 544 ntBASIC12.03□□□□□ -0.48
Hist1h3bP84228 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Hist1h3bP84228 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hist1h3bP84228 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Hist1h3bP84228 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist1h3bP84228 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist1h3bP84228 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.02□□□□□ -0.48
Hist1h3bP84228 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist1h3bP84228 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist1h3bP84228 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hist1h3bP84228 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.02□□□□□ -0.49
Hist1h3bP84228 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.02□□□□□ -0.49
Hist1h3bP84228 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.02□□□□□ -0.49
Hist1h3bP84228 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.02□□□□□ -0.49
Hist1h3bP84228 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.02□□□□□ -0.49
Hist1h3bP84228 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.02□□□□□ -0.49
Hist1h3bP84228 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h3bP84228 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hist1h3bP84228 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist1h3bP84228 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist1h3bP84228 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.01□□□□□ -0.49
Hist1h3bP84228 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist1h3bP84228 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Hist1h3bP84228 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hist1h3bP84228 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist1h3bP84228 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hist1h3bP84228 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hist1h3bP84228 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.01□□□□□ -0.49
Hist1h3bP84228 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.01□□□□□ -0.49
Hist1h3bP84228 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.01□□□□□ -0.49
Hist1h3bP84228 Gm24420-201ENSMUST00000176676 59 ntBASIC12.01□□□□□ -0.49
Hist1h3bP84228 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hist1h3bP84228 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms