Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Crnkl1P63154 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Crnkl1P63154 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.53□□□□□ -0.24
Crnkl1P63154 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Crnkl1P63154 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Crnkl1P63154 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.53□□□□□ -0.24
Crnkl1P63154 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.53□□□□□ -0.24
Crnkl1P63154 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Crnkl1P63154 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Crnkl1P63154 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.53□□□□□ -0.24
Crnkl1P63154 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Crnkl1P63154 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Crnkl1P63154 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Crnkl1P63154 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Crnkl1P63154 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.24
Crnkl1P63154 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Crnkl1P63154 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Crnkl1P63154 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Crnkl1P63154 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Crnkl1P63154 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Crnkl1P63154 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Crnkl1P63154 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Crnkl1P63154 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Crnkl1P63154 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Crnkl1P63154 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.52□□□□□ -0.25
Crnkl1P63154 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Crnkl1P63154 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.52□□□□□ -0.25
Crnkl1P63154 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.52□□□□□ -0.25
Crnkl1P63154 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.52□□□□□ -0.25
Crnkl1P63154 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.52□□□□□ -0.25
Crnkl1P63154 Gm24513-201ENSMUST00000174964 138 ntBASIC13.52□□□□□ -0.25
Crnkl1P63154 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Crnkl1P63154 Gm27397-201ENSMUST00000184997 107 ntBASIC13.52□□□□□ -0.25
Crnkl1P63154 Gm2272-201ENSMUST00000194903 582 ntBASIC13.52□□□□□ -0.25
Crnkl1P63154 Gm2756-201ENSMUST00000195851 400 ntBASIC13.52□□□□□ -0.25
Crnkl1P63154 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.52□□□□□ -0.25
Crnkl1P63154 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.52□□□□□ -0.25
Crnkl1P63154 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Crnkl1P63154 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Crnkl1P63154 Gm10175-201ENSMUST00000086013 645 ntBASIC13.52□□□□□ -0.25
Crnkl1P63154 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.52□□□□□ -0.25
Crnkl1P63154 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Crnkl1P63154 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Crnkl1P63154 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Crnkl1P63154 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Crnkl1P63154 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Crnkl1P63154 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Crnkl1P63154 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Crnkl1P63154 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.52□□□□□ -0.25
Crnkl1P63154 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.52□□□□□ -0.25
Crnkl1P63154 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.52□□□□□ -0.25
Crnkl1P63154 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Crnkl1P63154 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
Crnkl1P63154 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Crnkl1P63154 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Crnkl1P63154 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Crnkl1P63154 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Crnkl1P63154 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Crnkl1P63154 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Crnkl1P63154 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Crnkl1P63154 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Crnkl1P63154 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Crnkl1P63154 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Crnkl1P63154 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Crnkl1P63154 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.51□□□□□ -0.25
Crnkl1P63154 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Crnkl1P63154 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.51□□□□□ -0.25
Crnkl1P63154 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Crnkl1P63154 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms