Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx1P63006 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx1P63006 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx1P63006 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx1P63006 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx1P63006 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx1P63006 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx1P63006 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx1P63006 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx1P63006 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx1P63006 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Lhx1P63006 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx1P63006 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Lhx1P63006 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx1P63006 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx1P63006 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx1P63006 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.4□□□□□ -0.26
Lhx1P63006 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Lhx1P63006 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx1P63006 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.4□□□□□ -0.26
Lhx1P63006 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.4□□□□□ -0.26
Lhx1P63006 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Lhx1P63006 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.4□□□□□ -0.26
Lhx1P63006 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Lhx1P63006 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Lhx1P63006 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Lhx1P63006 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.4□□□□□ -0.26
Lhx1P63006 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx1P63006 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.4□□□□□ -0.26
Lhx1P63006 Gm18187-201ENSMUST00000196476 984 ntBASIC13.4□□□□□ -0.26
Lhx1P63006 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx1P63006 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.4□□□□□ -0.26
Lhx1P63006 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx1P63006 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx1P63006 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.4□□□□□ -0.26
Lhx1P63006 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx1P63006 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx1P63006 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx1P63006 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx1P63006 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx1P63006 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx1P63006 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx1P63006 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Lhx1P63006 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx1P63006 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Lhx1P63006 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.4□□□□□ -0.26
Lhx1P63006 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx1P63006 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.4□□□□□ -0.26
Lhx1P63006 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx1P63006 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Lhx1P63006 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Lhx1P63006 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Lhx1P63006 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Lhx1P63006 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx1P63006 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx1P63006 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Lhx1P63006 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.39□□□□□ -0.27
Lhx1P63006 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx1P63006 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx1P63006 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx1P63006 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Lhx1P63006 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx1P63006 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Lhx1P63006 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx1P63006 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.39□□□□□ -0.27
Lhx1P63006 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.39□□□□□ -0.27
Lhx1P63006 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx1P63006 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx1P63006 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx1P63006 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Lhx1P63006 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.39□□□□□ -0.27
Lhx1P63006 Gm6244-201ENSMUST00000178732 841 ntBASIC13.39□□□□□ -0.27
Lhx1P63006 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx1P63006 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx1P63006 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx1P63006 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.39□□□□□ -0.27
Lhx1P63006 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx1P63006 Gm7287-201ENSMUST00000205267 602 ntBASIC13.39□□□□□ -0.27
Lhx1P63006 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.39□□□□□ -0.27
Lhx1P63006 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.39□□□□□ -0.27
Lhx1P63006 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Lhx1P63006 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx1P63006 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx1P63006 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.39□□□□□ -0.27
Lhx1P63006 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx1P63006 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx1P63006 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx1P63006 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx1P63006 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx1P63006 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.39□□□□□ -0.27
Lhx1P63006 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lhx1P63006 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx1P63006 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx1P63006 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx1P63006 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx1P63006 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Lhx1P63006 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx1P63006 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Lhx1P63006 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Lhx1P63006 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms