Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1bP61025 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1bP61025 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1bP61025 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1bP61025 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1bP61025 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1bP61025 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1bP61025 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1bP61025 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Cks1bP61025 Gm14451-201ENSMUST00000121581 1542 ntBASIC9.77□□□□□ -0.85
Cks1bP61025 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1bP61025 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1bP61025 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1bP61025 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Cks1bP61025 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1bP61025 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Cks1bP61025 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1bP61025 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1bP61025 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Cks1bP61025 Gm8096-201ENSMUST00000209921 1591 ntBASIC9.76□□□□□ -0.85
Cks1bP61025 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Cks1bP61025 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC9.76□□□□□ -0.85
Cks1bP61025 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1bP61025 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1bP61025 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Cks1bP61025 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC9.76□□□□□ -0.85
Cks1bP61025 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1bP61025 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC9.76□□□□□ -0.85
Cks1bP61025 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1bP61025 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1bP61025 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC9.76□□□□□ -0.85
Cks1bP61025 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Cks1bP61025 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1bP61025 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1bP61025 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Cks1bP61025 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Cks1bP61025 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC9.76□□□□□ -0.85
Cks1bP61025 Gm6089-201ENSMUST00000197666 938 ntBASIC9.76□□□□□ -0.85
Cks1bP61025 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC9.76□□□□□ -0.85
Cks1bP61025 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1bP61025 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1bP61025 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1bP61025 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1bP61025 AC122291.1-201ENSMUST00000228937 5748 ntBASIC9.76□□□□□ -0.85
Cks1bP61025 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1bP61025 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1bP61025 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1bP61025 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cks1bP61025 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC9.76□□□□□ -0.85
Cks1bP61025 Gm5859-201ENSMUST00000165401 2324 ntBASIC9.76□□□□□ -0.85
Cks1bP61025 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC9.76□□□□□ -0.85
Cks1bP61025 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Cks1bP61025 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Cks1bP61025 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Zfp125-201ENSMUST00000079237 2488 ntBASIC9.75□□□□□ -0.85
Cks1bP61025 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC9.75□□□□□ -0.85
Cks1bP61025 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC9.75□□□□□ -0.85
Cks1bP61025 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC9.75□□□□□ -0.85
Cks1bP61025 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC9.75□□□□□ -0.85
Cks1bP61025 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC9.75□□□□□ -0.85
Cks1bP61025 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Cks1bP61025 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC9.75□□□□□ -0.85
Cks1bP61025 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Gm18669-201ENSMUST00000216049 778 ntBASIC9.75□□□□□ -0.85
Cks1bP61025 AC159106.1-201ENSMUST00000224421 690 ntBASIC9.75□□□□□ -0.85
Cks1bP61025 AC159301.1-201ENSMUST00000225130 1182 ntBASIC9.75□□□□□ -0.85
Cks1bP61025 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC9.75□□□□□ -0.85
Cks1bP61025 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC9.75□□□□□ -0.85
Cks1bP61025 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 AC211878.3-201ENSMUST00000222629 2018 ntBASIC9.75□□□□□ -0.85
Cks1bP61025 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Gm18856-201ENSMUST00000178096 1374 ntBASIC9.75□□□□□ -0.85
Cks1bP61025 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cks1bP61025 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms