Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RoraP51448 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.95□□□□□ -0.34
RoraP51448 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RoraP51448 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
RoraP51448 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RoraP51448 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RoraP51448 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.94□□□□□ -0.34
RoraP51448 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RoraP51448 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
RoraP51448 Gm13829-201ENSMUST00000119600 138 ntBASIC12.94□□□□□ -0.34
RoraP51448 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.94□□□□□ -0.34
RoraP51448 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
RoraP51448 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RoraP51448 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Gm29741-201ENSMUST00000192667 421 ntBASIC12.94□□□□□ -0.34
RoraP51448 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.94□□□□□ -0.34
RoraP51448 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.94□□□□□ -0.34
RoraP51448 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.94□□□□□ -0.34
RoraP51448 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.94□□□□□ -0.34
RoraP51448 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RoraP51448 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RoraP51448 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
RoraP51448 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.93□□□□□ -0.34
RoraP51448 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.93□□□□□ -0.34
RoraP51448 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.93□□□□□ -0.34
RoraP51448 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
RoraP51448 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.93□□□□□ -0.34
RoraP51448 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.93□□□□□ -0.34
RoraP51448 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
RoraP51448 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
RoraP51448 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
RoraP51448 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.93□□□□□ -0.34
RoraP51448 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.93□□□□□ -0.34
RoraP51448 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
RoraP51448 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RoraP51448 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.92□□□□□ -0.34
RoraP51448 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RoraP51448 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RoraP51448 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RoraP51448 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RoraP51448 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms