Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.44□□□□□ -0.1
Shmt1P50431 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shmt1P50431 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shmt1P50431 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shmt1P50431 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Shmt1P50431 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shmt1P50431 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.44□□□□□ -0.1
Shmt1P50431 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Shmt1P50431 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shmt1P50431 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.44□□□□□ -0.1
Shmt1P50431 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shmt1P50431 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shmt1P50431 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Shmt1P50431 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shmt1P50431 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shmt1P50431 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Shmt1P50431 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shmt1P50431 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Shmt1P50431 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shmt1P50431 Gm15770-201ENSMUST00000117498 584 ntBASIC14.43□□□□□ -0.1
Shmt1P50431 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.43□□□□□ -0.1
Shmt1P50431 Gm15429-201ENSMUST00000151268 798 ntBASIC14.43□□□□□ -0.1
Shmt1P50431 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.43□□□□□ -0.1
Shmt1P50431 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Shmt1P50431 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shmt1P50431 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.43□□□□□ -0.1
Shmt1P50431 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.43□□□□□ -0.1
Shmt1P50431 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shmt1P50431 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shmt1P50431 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
Shmt1P50431 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shmt1P50431 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Shmt1P50431 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shmt1P50431 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Shmt1P50431 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Shmt1P50431 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.43□□□□□ -0.1
Shmt1P50431 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Shmt1P50431 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Shmt1P50431 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Shmt1P50431 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Shmt1P50431 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Shmt1P50431 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.42□□□□□ -0.1
Shmt1P50431 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Shmt1P50431 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Shmt1P50431 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Shmt1P50431 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.42□□□□□ -0.1
Shmt1P50431 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.42□□□□□ -0.1
Shmt1P50431 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.42□□□□□ -0.1
Shmt1P50431 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.42□□□□□ -0.1
Shmt1P50431 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Shmt1P50431 Gm12403-201ENSMUST00000121384 959 ntBASIC14.42□□□□□ -0.1
Shmt1P50431 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.42□□□□□ -0.1
Shmt1P50431 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.42□□□□□ -0.1
Shmt1P50431 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Shmt1P50431 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Shmt1P50431 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Shmt1P50431 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.42□□□□□ -0.1
Shmt1P50431 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.42□□□□□ -0.1
Shmt1P50431 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.42□□□□□ -0.1
Shmt1P50431 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.42□□□□□ -0.1
Shmt1P50431 Gm29608-201ENSMUST00000190444 463 ntBASIC14.42□□□□□ -0.1
Shmt1P50431 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.42□□□□□ -0.1
Shmt1P50431 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Shmt1P50431 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Shmt1P50431 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.42□□□□□ -0.1
Shmt1P50431 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.42□□□□□ -0.1
Shmt1P50431 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Shmt1P50431 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.41□□□□□ -0.1
Shmt1P50431 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Shmt1P50431 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms