Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf4P43488 Gm24543-201ENSMUST00000103867 82 ntBASIC13.21□□□□□ -0.29
Tnfsf4P43488 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf4P43488 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.21□□□□□ -0.29
Tnfsf4P43488 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf4P43488 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf4P43488 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Tnfsf4P43488 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Tnfsf4P43488 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf4P43488 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf4P43488 Gm24158-201ENSMUST00000175263 71 ntBASIC13.21□□□□□ -0.29
Tnfsf4P43488 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf4P43488 Gm33320-201ENSMUST00000192232 530 ntBASIC13.21□□□□□ -0.29
Tnfsf4P43488 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.21□□□□□ -0.29
Tnfsf4P43488 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf4P43488 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf4P43488 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf4P43488 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf4P43488 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf4P43488 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf4P43488 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.21□□□□□ -0.29
Tnfsf4P43488 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Tnfsf4P43488 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tnfsf4P43488 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfsf4P43488 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfsf4P43488 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfsf4P43488 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfsf4P43488 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfsf4P43488 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfsf4P43488 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfsf4P43488 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfsf4P43488 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.21□□□□□ -0.3
Tnfsf4P43488 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tnfsf4P43488 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.2□□□□□ -0.3
Tnfsf4P43488 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.2□□□□□ -0.3
Tnfsf4P43488 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.2□□□□□ -0.3
Tnfsf4P43488 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Tnfsf4P43488 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf4P43488 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf4P43488 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf4P43488 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.19□□□□□ -0.3
Tnfsf4P43488 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf4P43488 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.19□□□□□ -0.3
Tnfsf4P43488 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf4P43488 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tnfsf4P43488 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf4P43488 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tnfsf4P43488 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf4P43488 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf4P43488 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf4P43488 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf4P43488 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.19□□□□□ -0.3
Tnfsf4P43488 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.19□□□□□ -0.3
Tnfsf4P43488 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Tnfsf4P43488 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Tnfsf4P43488 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf4P43488 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf4P43488 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf4P43488 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf4P43488 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf4P43488 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf4P43488 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf4P43488 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tnfsf4P43488 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms