Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdx2P43241 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx2P43241 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx2P43241 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.93□□□□□ -0.34
Cdx2P43241 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.93□□□□□ -0.34
Cdx2P43241 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx2P43241 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx2P43241 Gm12241-201ENSMUST00000118330 726 ntBASIC12.93□□□□□ -0.34
Cdx2P43241 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.93□□□□□ -0.34
Cdx2P43241 Gm45865-201ENSMUST00000211815 945 ntBASIC12.93□□□□□ -0.34
Cdx2P43241 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.93□□□□□ -0.34
Cdx2P43241 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx2P43241 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx2P43241 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx2P43241 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx2P43241 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cdx2P43241 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx2P43241 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx2P43241 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx2P43241 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx2P43241 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx2P43241 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx2P43241 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx2P43241 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cdx2P43241 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx2P43241 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.93□□□□□ -0.34
Cdx2P43241 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx2P43241 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx2P43241 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdx2P43241 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Cdx2P43241 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.92□□□□□ -0.34
Cdx2P43241 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Gm29396-201ENSMUST00000185659 716 ntBASIC12.92□□□□□ -0.34
Cdx2P43241 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cdx2P43241 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.92□□□□□ -0.34
Cdx2P43241 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cdx2P43241 Gm10608-202ENSMUST00000213924 676 ntBASIC12.92□□□□□ -0.34
Cdx2P43241 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.92□□□□□ -0.34
Cdx2P43241 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cdx2P43241 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.92□□□□□ -0.34
Cdx2P43241 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cdx2P43241 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cdx2P43241 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx2P43241 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cdx2P43241 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx2P43241 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cdx2P43241 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.91□□□□□ -0.34
Cdx2P43241 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx2P43241 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx2P43241 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.91□□□□□ -0.34
Cdx2P43241 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx2P43241 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Cdx2P43241 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.91□□□□□ -0.34
Cdx2P43241 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cdx2P43241 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.91□□□□□ -0.34
Cdx2P43241 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx2P43241 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.91□□□□□ -0.34
Cdx2P43241 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx2P43241 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cdx2P43241 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx2P43241 Gm14350-201ENSMUST00000116642 640 ntBASIC12.91□□□□□ -0.34
Cdx2P43241 Gm15808-201ENSMUST00000119046 604 ntBASIC12.91□□□□□ -0.34
Cdx2P43241 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx2P43241 Gm26083-201ENSMUST00000157904 193 ntBASIC12.91□□□□□ -0.34
Cdx2P43241 Gm16379-201ENSMUST00000161469 348 ntBASIC12.91□□□□□ -0.34
Cdx2P43241 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms