Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp9P41245 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.49□□□□□ -0.57
Mmp9P41245 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.49□□□□□ -0.57
Mmp9P41245 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp9P41245 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp9P41245 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp9P41245 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp9P41245 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Mmp9P41245 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp9P41245 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp9P41245 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.49□□□□□ -0.57
Mmp9P41245 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp9P41245 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp9P41245 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.49□□□□□ -0.57
Mmp9P41245 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
Mmp9P41245 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Mmp9P41245 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Mmp9P41245 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Mmp9P41245 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp9P41245 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp9P41245 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Mmp9P41245 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Mmp9P41245 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.48□□□□□ -0.57
Mmp9P41245 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Mmp9P41245 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Mmp9P41245 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.48□□□□□ -0.57
Mmp9P41245 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Mmp9P41245 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Mmp9P41245 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Mmp9P41245 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.48□□□□□ -0.57
Mmp9P41245 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Mmp9P41245 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.48□□□□□ -0.57
Mmp9P41245 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Mmp9P41245 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.48□□□□□ -0.57
Mmp9P41245 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Chchd1-203ENSMUST00000224633 557 ntBASIC11.48□□□□□ -0.57
Mmp9P41245 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Mmp9P41245 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Mmp9P41245 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.48□□□□□ -0.57
Mmp9P41245 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.48□□□□□ -0.57
Mmp9P41245 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.48□□□□□ -0.57
Mmp9P41245 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.48□□□□□ -0.57
Mmp9P41245 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.48□□□□□ -0.57
Mmp9P41245 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Mmp9P41245 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Mmp9P41245 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Mmp9P41245 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Mmp9P41245 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.47□□□□□ -0.57
Mmp9P41245 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.47□□□□□ -0.57
Mmp9P41245 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Mmp9P41245 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.47□□□□□ -0.57
Mmp9P41245 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Mmp9P41245 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Mmp9P41245 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.47□□□□□ -0.57
Mmp9P41245 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.47□□□□□ -0.57
Mmp9P41245 Gm16026-204ENSMUST00000162652 683 ntBASIC11.47□□□□□ -0.57
Mmp9P41245 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.47□□□□□ -0.57
Mmp9P41245 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.47□□□□□ -0.57
Mmp9P41245 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Mmp9P41245 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Mmp9P41245 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms