Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca1P41233 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca1P41233 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.38□□□□□ -0.59
Abca1P41233 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Abca1P41233 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca1P41233 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca1P41233 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca1P41233 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Abca1P41233 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.38□□□□□ -0.59
Abca1P41233 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
Abca1P41233 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Abca1P41233 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.38□□□□□ -0.59
Abca1P41233 Gm27486-201ENSMUST00000184923 80 ntBASIC11.38□□□□□ -0.59
Abca1P41233 Gm6983-201ENSMUST00000214912 628 ntBASIC11.38□□□□□ -0.59
Abca1P41233 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca1P41233 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Abca1P41233 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.38□□□□□ -0.59
Abca1P41233 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Abca1P41233 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Abca1P41233 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.37□□□□□ -0.59
Abca1P41233 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Abca1P41233 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.37□□□□□ -0.59
Abca1P41233 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.37□□□□□ -0.59
Abca1P41233 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Abca1P41233 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Abca1P41233 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.37□□□□□ -0.59
Abca1P41233 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Abca1P41233 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Abca1P41233 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.37□□□□□ -0.59
Abca1P41233 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Abca1P41233 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Abca1P41233 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Abca1P41233 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Abca1P41233 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca1P41233 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Abca1P41233 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Abca1P41233 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Abca1P41233 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Abca1P41233 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.36□□□□□ -0.59
Abca1P41233 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.36□□□□□ -0.59
Abca1P41233 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Abca1P41233 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abca1P41233 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.36□□□□□ -0.59
Abca1P41233 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abca1P41233 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abca1P41233 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abca1P41233 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Abca1P41233 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abca1P41233 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.36□□□□□ -0.59
Abca1P41233 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abca1P41233 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.36□□□□□ -0.59
Abca1P41233 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Abca1P41233 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.36□□□□□ -0.59
Abca1P41233 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abca1P41233 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.36□□□□□ -0.59
Abca1P41233 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.36□□□□□ -0.59
Abca1P41233 Gm18027-201ENSMUST00000218947 619 ntBASIC11.36□□□□□ -0.59
Abca1P41233 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.36□□□□□ -0.59
Abca1P41233 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.36□□□□□ -0.59
Abca1P41233 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.36□□□□□ -0.59
Abca1P41233 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.36□□□□□ -0.59
Abca1P41233 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.36□□□□□ -0.59
Abca1P41233 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Abca1P41233 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Abca1P41233 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abca1P41233 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abca1P41233 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Abca1P41233 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abca1P41233 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms