Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.99□□□□□ -0.17
Cxcl12P40224 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cxcl12P40224 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.99□□□□□ -0.17
Cxcl12P40224 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.99□□□□□ -0.17
Cxcl12P40224 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl12P40224 Gm26956-201ENSMUST00000182176 986 ntBASIC13.99□□□□□ -0.17
Cxcl12P40224 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.99□□□□□ -0.17
Cxcl12P40224 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl12P40224 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl12P40224 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.99□□□□□ -0.17
Cxcl12P40224 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl12P40224 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl12P40224 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cxcl12P40224 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Cxcl12P40224 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Cxcl12P40224 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl12P40224 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl12P40224 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl12P40224 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl12P40224 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl12P40224 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl12P40224 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cxcl12P40224 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl12P40224 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl12P40224 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cxcl12P40224 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl12P40224 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl12P40224 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl12P40224 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl12P40224 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.98□□□□□ -0.17
Cxcl12P40224 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Cxcl12P40224 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl12P40224 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl12P40224 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl12P40224 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cxcl12P40224 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Cxcl12P40224 Gm11439-201ENSMUST00000118598 409 ntBASIC13.98□□□□□ -0.17
Cxcl12P40224 Gm11637-201ENSMUST00000120601 592 ntBASIC13.98□□□□□ -0.17
Cxcl12P40224 Gm16479-201ENSMUST00000121706 932 ntBASIC13.98□□□□□ -0.17
Cxcl12P40224 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.98□□□□□ -0.17
Cxcl12P40224 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cxcl12P40224 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cxcl12P40224 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cxcl12P40224 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.98□□□□□ -0.17
Cxcl12P40224 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.98□□□□□ -0.17
Cxcl12P40224 Gm31256-201ENSMUST00000194705 506 ntBASIC13.98□□□□□ -0.17
Cxcl12P40224 Gm4768-201ENSMUST00000206199 686 ntBASIC13.98□□□□□ -0.17
Cxcl12P40224 Gm30285-201ENSMUST00000214614 422 ntBASIC13.98□□□□□ -0.17
Cxcl12P40224 Gm29787-201ENSMUST00000222129 849 ntBASIC13.98□□□□□ -0.17
Cxcl12P40224 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.98□□□□□ -0.17
Cxcl12P40224 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl12P40224 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl12P40224 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Cxcl12P40224 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl12P40224 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl12P40224 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl12P40224 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.98□□□□□ -0.17
Cxcl12P40224 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl12P40224 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl12P40224 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl12P40224 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cxcl12P40224 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.98□□□□□ -0.17
Cxcl12P40224 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl12P40224 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cxcl12P40224 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl12P40224 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl12P40224 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl12P40224 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cxcl12P40224 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl12P40224 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.97□□□□□ -0.17
Cxcl12P40224 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cxcl12P40224 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl12P40224 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Cxcl12P40224 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl12P40224 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl12P40224 Gm14028-201ENSMUST00000117434 479 ntBASIC13.97□□□□□ -0.17
Cxcl12P40224 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.97□□□□□ -0.17
Cxcl12P40224 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl12P40224 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.97□□□□□ -0.17
Cxcl12P40224 Gm37042-201ENSMUST00000193816 581 ntBASIC13.97□□□□□ -0.17
Cxcl12P40224 Gm43947-201ENSMUST00000203019 959 ntBASIC13.97□□□□□ -0.17
Cxcl12P40224 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl12P40224 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl12P40224 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cxcl12P40224 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl12P40224 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Cxcl12P40224 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl12P40224 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl12P40224 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl12P40224 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl12P40224 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl12P40224 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl12P40224 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl12P40224 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl12P40224 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cxcl12P40224 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cxcl12P40224 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.96□□□□□ -0.17
Cxcl12P40224 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cxcl12P40224 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cxcl12P40224 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms