Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Timp3P39876 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Timp3P39876 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Timp3P39876 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Timp3P39876 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Timp3P39876 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Timp3P39876 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Timp3P39876 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Timp3P39876 Gm11478-201ENSMUST00000117851 599 ntBASIC11.23□□□□□ -0.61
Timp3P39876 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Timp3P39876 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.23□□□□□ -0.61
Timp3P39876 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.23□□□□□ -0.61
Timp3P39876 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Timp3P39876 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Timp3P39876 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Timp3P39876 Gm5354-201ENSMUST00000182417 973 ntBASIC11.23□□□□□ -0.61
Timp3P39876 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Timp3P39876 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Timp3P39876 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Timp3P39876 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.23□□□□□ -0.61
Timp3P39876 Gm18624-201ENSMUST00000220966 658 ntBASIC11.23□□□□□ -0.61
Timp3P39876 Gm6180-201ENSMUST00000065243 498 ntBASIC11.23□□□□□ -0.61
Timp3P39876 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Timp3P39876 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Timp3P39876 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.23□□□□□ -0.61
Timp3P39876 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Timp3P39876 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Timp3P39876 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Timp3P39876 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Timp3P39876 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Timp3P39876 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Timp3P39876 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Timp3P39876 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Timp3P39876 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Timp3P39876 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Timp3P39876 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Timp3P39876 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Timp3P39876 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Timp3P39876 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Timp3P39876 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Timp3P39876 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Timp3P39876 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Timp3P39876 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Timp3P39876 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Timp3P39876 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.22□□□□□ -0.61
Timp3P39876 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Timp3P39876 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Timp3P39876 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Timp3P39876 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Timp3P39876 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.22□□□□□ -0.61
Timp3P39876 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 Gm12091-201ENSMUST00000146791 830 ntBASIC11.22□□□□□ -0.61
Timp3P39876 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Timp3P39876 Gm23984-201ENSMUST00000157139 203 ntBASIC11.22□□□□□ -0.61
Timp3P39876 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Timp3P39876 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Timp3P39876 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.22□□□□□ -0.61
Timp3P39876 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Timp3P39876 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.22□□□□□ -0.61
Timp3P39876 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.22□□□□□ -0.61
Timp3P39876 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.22□□□□□ -0.61
Timp3P39876 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.22□□□□□ -0.61
Timp3P39876 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.22□□□□□ -0.61
Timp3P39876 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.22□□□□□ -0.61
Timp3P39876 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Timp3P39876 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Timp3P39876 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.22□□□□□ -0.61
Timp3P39876 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Timp3P39876 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Timp3P39876 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Timp3P39876 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Timp3P39876 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Timp3P39876 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Timp3P39876 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Timp3P39876 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Timp3P39876 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.21□□□□□ -0.61
Timp3P39876 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms